Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SYCE3A1L190 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.65■□□□□ 0.9
SYCE3A1L190 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.65■□□□□ 0.9
SYCE3A1L190 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.65■□□□□ 0.9
SYCE3A1L190 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.65■□□□□ 0.9
SYCE3A1L190 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.65■□□□□ 0.9
SYCE3A1L190 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SYCE3A1L190 CKBP1-201ENST00000565489 1086 ntBASIC20.65■□□□□ 0.9
SYCE3A1L190 MIR5787-201ENST00000611784 55 ntBASIC20.65■□□□□ 0.9
SYCE3A1L190 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SYCE3A1L190 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.65■□□□□ 0.9
SYCE3A1L190 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYCE3A1L190 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYCE3A1L190 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYCE3A1L190 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYCE3A1L190 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYCE3A1L190 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYCE3A1L190 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYCE3A1L190 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYCE3A1L190 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.64■□□□□ 0.89
SYCE3A1L190 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYCE3A1L190 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYCE3A1L190 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYCE3A1L190 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SYCE3A1L190 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.64■□□□□ 0.89
SYCE3A1L190 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.64■□□□□ 0.89
SYCE3A1L190 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SYCE3A1L190 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SYCE3A1L190 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.64■□□□□ 0.89
SYCE3A1L190 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.64■□□□□ 0.89
SYCE3A1L190 MTDHP1-201ENST00000605323 784 ntBASIC20.64■□□□□ 0.89
SYCE3A1L190 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYCE3A1L190 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.64■□□□□ 0.89
SYCE3A1L190 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SYCE3A1L190 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.64■□□□□ 0.89
SYCE3A1L190 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SYCE3A1L190 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.64■□□□□ 0.89
SYCE3A1L190 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYCE3A1L190 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.63■□□□□ 0.89
SYCE3A1L190 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.63■□□□□ 0.89
SYCE3A1L190 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SYCE3A1L190 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYCE3A1L190 NCF1B-203ENST00000435988 1254 ntBASIC20.63■□□□□ 0.89
SYCE3A1L190 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.63■□□□□ 0.89
SYCE3A1L190 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.63■□□□□ 0.89
SYCE3A1L190 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.63■□□□□ 0.89
SYCE3A1L190 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.63■□□□□ 0.89
SYCE3A1L190 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.63■□□□□ 0.89
SYCE3A1L190 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
SYCE3A1L190 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SYCE3A1L190 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SYCE3A1L190 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.63■□□□□ 0.89
SYCE3A1L190 AL138688.1-201ENST00000624851 1594 ntBASIC20.63■□□□□ 0.89
SYCE3A1L190 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.63■□□□□ 0.89
SYCE3A1L190 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.63■□□□□ 0.89
SYCE3A1L190 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SYCE3A1L190 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.62■□□□□ 0.89
SYCE3A1L190 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.62■□□□□ 0.89
SYCE3A1L190 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SYCE3A1L190 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.62■□□□□ 0.89
SYCE3A1L190 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
SYCE3A1L190 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SYCE3A1L190 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.62■□□□□ 0.89
SYCE3A1L190 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SYCE3A1L190 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.62■□□□□ 0.89
SYCE3A1L190 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms