Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.83□□□□□ -0.35
TRBV27A0A0K0K1C4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV27A0A0K0K1C4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
TRBV27A0A0K0K1C4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 AC036111.1-201ENST00000533973 1582 ntBASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 AC233263.1-201ENST00000578059 224 ntBASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 AC011676.5-201ENST00000624864 2660 ntBASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRBV27A0A0K0K1C4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 KRT8P7-201ENST00000533003 1432 ntBASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 HOXB1-202ENST00000577092 1414 ntBASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 DUTP2-201ENST00000519164 463 ntBASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 MIR3180-5-201ENST00000583743 153 ntBASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV27A0A0K0K1C4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms