Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 AP001094.4-201ENST00000579008 2176 ntBASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 NKILA-202ENST00000614771 2598 ntBASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 AC091390.4-202ENST00000476426 537 ntBASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 AL137784.2-201ENST00000607332 1000 ntBASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 AL445675.2-201ENST00000620291 557 ntBASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV18A0A075B6X5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 NCF1B-203ENST00000435988 1254 ntBASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 AL138781.1-201ENST00000566567 1274 ntBASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 AC011676.5-201ENST00000624864 2660 ntBASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 KRT18P55-202ENST00000578578 1546 ntBASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV18A0A075B6X5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms