Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIC4Q9Y696 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 KRT18P55-202ENST00000578578 1546 ntBASIC20.73■□□□□ 0.91
CLIC4Q9Y696 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.73■□□□□ 0.91
CLIC4Q9Y696 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 AC087499.1-201ENST00000418141 1075 ntBASIC20.73■□□□□ 0.91
CLIC4Q9Y696 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLIC4Q9Y696 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 AL138966.2-201ENST00000621997 464 ntBASIC20.72■□□□□ 0.91
CLIC4Q9Y696 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 AC100803.2-201ENST00000562459 1963 ntBASIC20.72■□□□□ 0.91
CLIC4Q9Y696 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.72■□□□□ 0.91
CLIC4Q9Y696 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 AL512604.3-201ENST00000569583 964 ntBASIC20.71■□□□□ 0.91
CLIC4Q9Y696 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 AC141257.4-201ENST00000634557 245 ntBASIC20.71■□□□□ 0.91
CLIC4Q9Y696 AC136944.6-201ENST00000634818 245 ntBASIC20.71■□□□□ 0.91
CLIC4Q9Y696 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 KRT18P22-201ENST00000402024 1347 ntBASIC20.71■□□□□ 0.91
CLIC4Q9Y696 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLIC4Q9Y696 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
CLIC4Q9Y696 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 GCSHP2-201ENST00000560971 527 ntBASIC20.7■□□□□ 0.9
CLIC4Q9Y696 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLIC4Q9Y696 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms