Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC012615.1-201ENST00000565797 1299 ntBASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 AC090616.6-201ENST00000582640 721 ntBASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 AL121772.3-201ENST00000610840 674 ntBASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA3Q9Y5H0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA3Q9Y5H0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.64■□□□□ 0.42
PCDHGA3Q9Y5H0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA3Q9Y5H0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 KRT8P10-201ENST00000450021 1447 ntBASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA3Q9Y5H0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 AC034236.2-201ENST00000606662 1610 ntBASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 LINC00265-3P-201ENST00000447588 903 ntBASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 IFNL4P1-201ENST00000607083 540 ntBASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA3Q9Y5H0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 Z83836.1-201ENST00000624605 1642 ntBASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA3Q9Y5H0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms