Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 AP005901.3-202ENST00000581653 237 ntBASIC16.64■□□□□ 0.25
LRFN1Q9P244 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.64■□□□□ 0.25
LRFN1Q9P244 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRFN1Q9P244 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 AC091607.1-201ENST00000490318 1060 ntBASIC16.63■□□□□ 0.25
LRFN1Q9P244 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN1Q9P244 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 LINC01126-201ENST00000623515 1646 ntBASIC16.63■□□□□ 0.25
LRFN1Q9P244 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LRFN1Q9P244 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN1Q9P244 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN1Q9P244 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 LINC00602-201ENST00000629776 2065 ntBASIC16.61■□□□□ 0.25
LRFN1Q9P244 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 AC020763.4-201ENST00000623414 4170 ntBASIC16.61■□□□□ 0.25
LRFN1Q9P244 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms