Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 KRT18P35-201ENST00000510488 1269 ntBASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 VENTXP5-201ENST00000523979 775 ntBASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SDHAF3Q9NRP4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AC113404.2-201ENST00000507884 177 ntBASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AL024508.2-201ENST00000607749 1894 ntBASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AC083849.1-201ENST00000615227 514 ntBASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SDHAF3Q9NRP4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 ESPNP-201ENST00000270691 2015 ntBASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 AL645929.1-201ENST00000420084 975 ntBASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SDHAF3Q9NRP4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
SDHAF3Q9NRP4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms