Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 FAM220CP-201ENST00000395253 831 ntBASIC20.25■□□□□ 0.83
VTA1Q9NP79 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 AL139288.1-201ENST00000623748 933 ntBASIC20.25■□□□□ 0.83
VTA1Q9NP79 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
VTA1Q9NP79 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 AC132938.6-201ENST00000623828 1655 ntBASIC20.24■□□□□ 0.83
VTA1Q9NP79 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.24■□□□□ 0.83
VTA1Q9NP79 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.24■□□□□ 0.83
VTA1Q9NP79 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.24■□□□□ 0.83
VTA1Q9NP79 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.24■□□□□ 0.83
VTA1Q9NP79 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VTA1Q9NP79 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 ZNF259P1-201ENST00000407656 1365 ntBASIC20.23■□□□□ 0.83
VTA1Q9NP79 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTA1Q9NP79 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.23■□□□□ 0.83
VTA1Q9NP79 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 KRT18P13-201ENST00000400056 1290 ntBASIC20.22■□□□□ 0.83
VTA1Q9NP79 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 RPS2P1-201ENST00000434010 821 ntBASIC20.22■□□□□ 0.83
VTA1Q9NP79 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
VTA1Q9NP79 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VTA1Q9NP79 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 ESPNP-201ENST00000270691 2015 ntBASIC20.21■□□□□ 0.83
VTA1Q9NP79 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 AC007967.3-201ENST00000434308 558 ntBASIC20.21■□□□□ 0.83
VTA1Q9NP79 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms