Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 IGHGP-201ENST00000390555 1178 ntBASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 AL136038.3-201ENST00000561909 1096 ntBASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 AC010331.1-201ENST00000611423 582 ntBASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1EQ9GZS1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
POLR1EQ9GZS1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 LINC00602-201ENST00000629776 2065 ntBASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 MIR1224-201ENST00000408193 85 ntBASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.39■□□□□ 0.53
POLR1EQ9GZS1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 GPR32P1-201ENST00000601788 811 ntBASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 AC004263.2-201ENST00000617183 678 ntBASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 LINC00167-201ENST00000530583 1419 ntBASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 AC132938.6-201ENST00000623828 1655 ntBASIC18.38■□□□□ 0.53
POLR1EQ9GZS1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 AC090340.1-201ENST00000620778 4980 ntBASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms