Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LITAFQ99732 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.08□□□□□ -0.48
LITAFQ99732 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.08□□□□□ -0.48
LITAFQ99732 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LITAFQ99732 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 AC060834.1-201ENST00000443027 2032 ntBASIC12.08□□□□□ -0.48
LITAFQ99732 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.08□□□□□ -0.48
LITAFQ99732 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.07□□□□□ -0.48
LITAFQ99732 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
LITAFQ99732 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
LITAFQ99732 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LITAFQ99732 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.07□□□□□ -0.48
LITAFQ99732 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.07□□□□□ -0.48
LITAFQ99732 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.07□□□□□ -0.48
LITAFQ99732 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.07□□□□□ -0.48
LITAFQ99732 NTF6G-201ENST00000591094 616 ntBASIC12.07□□□□□ -0.48
LITAFQ99732 AC131212.1-201ENST00000613771 668 ntBASIC12.07□□□□□ -0.48
LITAFQ99732 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.07□□□□□ -0.48
LITAFQ99732 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 LINC01126-201ENST00000623515 1646 ntBASIC12.07□□□□□ -0.48
LITAFQ99732 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LITAFQ99732 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LITAFQ99732 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.06□□□□□ -0.48
LITAFQ99732 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 SDHAP2-201ENST00000455183 2001 ntBASIC12.06□□□□□ -0.48
LITAFQ99732 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 LINC00554-201ENST00000564841 3011 ntBASIC12.06□□□□□ -0.48
LITAFQ99732 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.06□□□□□ -0.48
LITAFQ99732 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LITAFQ99732 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LITAFQ99732 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.06□□□□□ -0.48
LITAFQ99732 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LITAFQ99732 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LITAFQ99732 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms