Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP2Q96SN8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.28■■□□□ 1
CDK5RAP2Q96SN8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP2Q96SN8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP2Q96SN8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 AC079776.2-201ENST00000641154 1609 ntBASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.27■■□□□ 1
CDK5RAP2Q96SN8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDK5RAP2Q96SN8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 AL031284.1-201ENST00000419297 478 ntBASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 MTDHP3-201ENST00000594186 672 ntBASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP2Q96SN8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 MIR5100-201ENST00000579544 119 ntBASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP2Q96SN8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 AC021087.4-201ENST00000563761 564 ntBASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 AL049840.3-201ENST00000602669 611 ntBASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 BX640515.1-201ENST00000617215 977 ntBASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP2Q96SN8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms