Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
IFT140Q96RY7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
IFT140Q96RY7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
IFT140Q96RY7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC29.87■■■□□ 2.37
IFT140Q96RY7 DUT-210ENST00000559935 569 ntTSL 3 BASIC29.87■■■□□ 2.37
IFT140Q96RY7 AC025678.2-201ENST00000562061 970 ntBASIC29.87■■■□□ 2.37
IFT140Q96RY7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
IFT140Q96RY7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC29.87■■■□□ 2.37
IFT140Q96RY7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC29.87■■■□□ 2.37
IFT140Q96RY7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
IFT140Q96RY7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 FAM86GP-201ENST00000448322 971 ntBASIC29.86■■■□□ 2.37
IFT140Q96RY7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC29.86■■■□□ 2.37
IFT140Q96RY7 OR7E47P-204ENST00000575924 449 ntBASIC29.86■■■□□ 2.37
IFT140Q96RY7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 AC063926.2-201ENST00000623766 1308 ntBASIC29.85■■■□□ 2.37
IFT140Q96RY7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 AL353593.2-201ENST00000602529 1483 ntBASIC29.85■■■□□ 2.37
IFT140Q96RY7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
IFT140Q96RY7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
IFT140Q96RY7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
IFT140Q96RY7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
IFT140Q96RY7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
IFT140Q96RY7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC29.84■■■□□ 2.37
IFT140Q96RY7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC29.84■■■□□ 2.37
IFT140Q96RY7 TBC1D3P5-201ENST00000579401 1545 ntBASIC29.84■■■□□ 2.37
IFT140Q96RY7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
IFT140Q96RY7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
IFT140Q96RY7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC29.84■■■□□ 2.37
IFT140Q96RY7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC29.84■■■□□ 2.37
IFT140Q96RY7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC29.84■■■□□ 2.37
IFT140Q96RY7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC29.84■■■□□ 2.37
IFT140Q96RY7 AC009093.7-201ENST00000623853 1223 ntBASIC29.84■■■□□ 2.37
IFT140Q96RY7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC29.84■■■□□ 2.37
IFT140Q96RY7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC29.84■■■□□ 2.37
IFT140Q96RY7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
IFT140Q96RY7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
IFT140Q96RY7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
IFT140Q96RY7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
IFT140Q96RY7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
IFT140Q96RY7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 AC007274.1-201ENST00000439805 662 ntBASIC29.83■■■□□ 2.37
IFT140Q96RY7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 LINC00628-201ENST00000628516 1289 ntBASIC29.83■■■□□ 2.37
IFT140Q96RY7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC29.83■■■□□ 2.37
IFT140Q96RY7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
IFT140Q96RY7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
IFT140Q96RY7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
IFT140Q96RY7 BAD-202ENST00000394531 631 ntTSL 3 BASIC29.82■■■□□ 2.36
IFT140Q96RY7 AC074386.1-202ENST00000463561 864 ntBASIC29.82■■■□□ 2.36
IFT140Q96RY7 AC093520.2-201ENST00000561830 333 ntBASIC29.82■■■□□ 2.36
IFT140Q96RY7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC29.82■■■□□ 2.36
IFT140Q96RY7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC29.82■■■□□ 2.36
IFT140Q96RY7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC29.82■■■□□ 2.36
IFT140Q96RY7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC29.82■■■□□ 2.36
IFT140Q96RY7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC29.82■■■□□ 2.36
IFT140Q96RY7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
IFT140Q96RY7 AC125437.2-201ENST00000625180 2167 ntBASIC29.82■■■□□ 2.36
IFT140Q96RY7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC29.82■■■□□ 2.36
IFT140Q96RY7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
IFT140Q96RY7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC29.81■■■□□ 2.36
IFT140Q96RY7 HLA-DRB6-201ENST00000411500 1235 ntBASIC29.81■■■□□ 2.36
IFT140Q96RY7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms