Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 ESPNP-201ENST00000270691 2015 ntBASIC19.3■□□□□ 0.68
CASD1Q96PB1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.29■□□□□ 0.68
CASD1Q96PB1 AC104109.2-201ENST00000602919 1418 ntBASIC19.29■□□□□ 0.68
CASD1Q96PB1 AC092910.1-201ENST00000482027 1129 ntBASIC19.29■□□□□ 0.68
CASD1Q96PB1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.29■□□□□ 0.68
CASD1Q96PB1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 AC092865.5-201ENST00000545435 363 ntBASIC19.29■□□□□ 0.68
CASD1Q96PB1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
CASD1Q96PB1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASD1Q96PB1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
CASD1Q96PB1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.29■□□□□ 0.68
CASD1Q96PB1 HLA-J-201ENST00000462773 1622 ntBASIC19.29■□□□□ 0.68
CASD1Q96PB1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 MTDHP4-201ENST00000600287 670 ntBASIC19.28■□□□□ 0.68
CASD1Q96PB1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASD1Q96PB1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CASD1Q96PB1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 AL031598.1-201ENST00000561511 1773 ntBASIC19.27■□□□□ 0.68
CASD1Q96PB1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.27■□□□□ 0.68
CASD1Q96PB1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 AC098831.1-202ENST00000438821 336 ntBASIC19.27■□□□□ 0.68
CASD1Q96PB1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASD1Q96PB1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.27■□□□□ 0.68
CASD1Q96PB1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASD1Q96PB1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CASD1Q96PB1 AC126763.1-201ENST00000552015 2118 ntBASIC19.27■□□□□ 0.67
CASD1Q96PB1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASD1Q96PB1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.27■□□□□ 0.67
CASD1Q96PB1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASD1Q96PB1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASD1Q96PB1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASD1Q96PB1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 AC096633.1-201ENST00000422446 749 ntBASIC19.26■□□□□ 0.67
CASD1Q96PB1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 PGAM5P1-201ENST00000518923 814 ntBASIC19.26■□□□□ 0.67
CASD1Q96PB1 AC034105.1-201ENST00000563488 319 ntBASIC19.26■□□□□ 0.67
CASD1Q96PB1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 AC008735.5-201ENST00000623544 497 ntBASIC19.26■□□□□ 0.67
CASD1Q96PB1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CASD1Q96PB1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms