Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 AC009947.2-201ENST00000444014 672 ntBASIC17.17■□□□□ 0.34
COL21A1Q96P44 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 AL138966.2-201ENST00000621997 464 ntBASIC17.17■□□□□ 0.34
COL21A1Q96P44 AC141257.4-201ENST00000634557 245 ntBASIC17.17■□□□□ 0.34
COL21A1Q96P44 AC136944.6-201ENST00000634818 245 ntBASIC17.17■□□□□ 0.34
COL21A1Q96P44 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 AC034236.2-201ENST00000606662 1610 ntBASIC17.17■□□□□ 0.34
COL21A1Q96P44 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 AP000593.1-201ENST00000393668 712 ntBASIC17.16■□□□□ 0.34
COL21A1Q96P44 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 AP000523.1-201ENST00000398242 1049 ntBASIC17.16■□□□□ 0.34
COL21A1Q96P44 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
COL21A1Q96P44 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL21A1Q96P44 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 AC073508.3-201ENST00000619697 1419 ntBASIC17.15■□□□□ 0.34
COL21A1Q96P44 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.15■□□□□ 0.34
COL21A1Q96P44 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 NEK4P2-201ENST00000580004 1012 ntBASIC17.15■□□□□ 0.34
COL21A1Q96P44 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.15■□□□□ 0.34
COL21A1Q96P44 AC092865.7-201ENST00000641832 219 ntBASIC17.15■□□□□ 0.34
COL21A1Q96P44 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL21A1Q96P44 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms