Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.21■□□□□ 0.67
CALR3Q96L12 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CALR3Q96L12 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CALR3Q96L12 LINC01126-201ENST00000623515 1646 ntBASIC19.21■□□□□ 0.67
CALR3Q96L12 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.21■□□□□ 0.67
CALR3Q96L12 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.21■□□□□ 0.67
CALR3Q96L12 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
CALR3Q96L12 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CALR3Q96L12 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.2■□□□□ 0.66
CALR3Q96L12 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CALR3Q96L12 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.2■□□□□ 0.66
CALR3Q96L12 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.2■□□□□ 0.66
CALR3Q96L12 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 UNC93B2-201ENST00000285383 730 ntBASIC19.2■□□□□ 0.66
CALR3Q96L12 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CALR3Q96L12 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.2■□□□□ 0.66
CALR3Q96L12 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.2■□□□□ 0.66
CALR3Q96L12 AC010653.2-201ENST00000623505 997 ntBASIC19.2■□□□□ 0.66
CALR3Q96L12 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CALR3Q96L12 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CALR3Q96L12 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 AL024508.2-201ENST00000607749 1894 ntBASIC19.2■□□□□ 0.66
CALR3Q96L12 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CALR3Q96L12 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
CALR3Q96L12 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALR3Q96L12 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CALR3Q96L12 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.19■□□□□ 0.66
CALR3Q96L12 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.19■□□□□ 0.66
CALR3Q96L12 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CALR3Q96L12 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.19■□□□□ 0.66
CALR3Q96L12 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.19■□□□□ 0.66
CALR3Q96L12 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.19■□□□□ 0.66
CALR3Q96L12 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CALR3Q96L12 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.19■□□□□ 0.66
CALR3Q96L12 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.19■□□□□ 0.66
CALR3Q96L12 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.19■□□□□ 0.66
CALR3Q96L12 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.19■□□□□ 0.66
CALR3Q96L12 AC116562.4-202ENST00000641738 218 ntBASIC19.19■□□□□ 0.66
CALR3Q96L12 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
CALR3Q96L12 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CALR3Q96L12 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CALR3Q96L12 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CALR3Q96L12 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.19■□□□□ 0.66
CALR3Q96L12 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
CALR3Q96L12 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALR3Q96L12 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.18■□□□□ 0.66
CALR3Q96L12 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.18■□□□□ 0.66
CALR3Q96L12 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.18■□□□□ 0.66
CALR3Q96L12 PRORSD1P-201ENST00000295112 541 ntBASIC19.18■□□□□ 0.66
CALR3Q96L12 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.18■□□□□ 0.66
CALR3Q96L12 GCSHP5-201ENST00000443090 522 ntBASIC19.18■□□□□ 0.66
CALR3Q96L12 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.18■□□□□ 0.66
CALR3Q96L12 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.18■□□□□ 0.66
CALR3Q96L12 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.18■□□□□ 0.66
CALR3Q96L12 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.18■□□□□ 0.66
CALR3Q96L12 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CALR3Q96L12 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms