Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAX2Q96IS3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAX2Q96IS3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAX2Q96IS3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 Z83836.1-201ENST00000624605 1642 ntBASIC14.16□□□□□ -0.14
RAX2Q96IS3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 CHCHD2P8-201ENST00000429873 447 ntBASIC14.16□□□□□ -0.14
RAX2Q96IS3 AP002383.4-201ENST00000442518 975 ntBASIC14.16□□□□□ -0.14
RAX2Q96IS3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAX2Q96IS3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAX2Q96IS3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 AL356309.3-201ENST00000624132 1934 ntBASIC14.15□□□□□ -0.14
RAX2Q96IS3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 MIR3180-1-201ENST00000580374 94 ntBASIC14.15□□□□□ -0.14
RAX2Q96IS3 MIR3180-3-201ENST00000584616 94 ntBASIC14.15□□□□□ -0.14
RAX2Q96IS3 AP002414.4-201ENST00000589764 1148 ntBASIC14.15□□□□□ -0.14
RAX2Q96IS3 AC005332.3-201ENST00000589904 676 ntBASIC14.15□□□□□ -0.14
RAX2Q96IS3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 AC012313.10-201ENST00000623509 926 ntBASIC14.15□□□□□ -0.14
RAX2Q96IS3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 AL163051.1-201ENST00000569214 1512 ntBASIC14.15□□□□□ -0.14
RAX2Q96IS3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAX2Q96IS3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RAX2Q96IS3 KRT18P1-202ENST00000452408 1331 ntBASIC14.15□□□□□ -0.15
RAX2Q96IS3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.15□□□□□ -0.15
RAX2Q96IS3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
RAX2Q96IS3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms