Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 AC009154.2-201ENST00000621177 724 ntBASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTHRC1Q96CG8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AC022898.2-201ENST00000616822 1312 ntBASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AC087388.1-201ENST00000571370 1112 ntBASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AC011498.5-201ENST00000592027 486 ntBASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AC116407.4-201ENST00000623319 1061 ntBASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CTHRC1Q96CG8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 AIRN-201ENST00000601203 4374 ntBASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms