Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 NUS1P2-201ENST00000417358 873 ntBASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 MINOS1P3-201ENST00000457048 203 ntBASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 AP002469.2-201ENST00000531724 424 ntBASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 AL121912.1-201ENST00000603683 238 ntBASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6V0A1Q93050 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP6V0A1Q93050 LINC00602-201ENST00000629776 2065 ntBASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6V0A1Q93050 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 AC009154.2-201ENST00000621177 724 ntBASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP6V0A1Q93050 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 AKR1C7P-201ENST00000305623 895 ntBASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 SLC25A6P4-201ENST00000586535 553 ntBASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms