Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 DUTP2-201ENST00000519164 463 ntBASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AC009065.1-201ENST00000564055 1225 ntBASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 CR769767.2-201ENST00000622735 460 ntBASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AC066615.1-201ENST00000640911 628 ntBASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 AP003041.3-201ENST00000527151 707 ntBASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 AP005242.2-201ENST00000580065 1175 ntBASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 MIR3180-4-201ENST00000582223 153 ntBASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC44A1Q8WWI5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 AC104390.1-201ENST00000555663 520 ntBASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 HTR7P1-202ENST00000624664 4411 ntBASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC44A1Q8WWI5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AL353719.1-201ENST00000566847 864 ntBASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AC113410.3-201ENST00000623366 203 ntBASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms