Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC25A24-204ENST00000569674 2357 ntBASIC21.98■■□□□ 1.11
SNED1Q8TER0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 KRT18P2-201ENST00000447938 1258 ntBASIC21.98■■□□□ 1.11
SNED1Q8TER0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 BX005266.1-201ENST00000473402 457 ntBASIC21.98■■□□□ 1.11
SNED1Q8TER0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.98■■□□□ 1.11
SNED1Q8TER0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 AD001527.2-201ENST00000622994 785 ntBASIC21.98■■□□□ 1.11
SNED1Q8TER0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNED1Q8TER0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.98■■□□□ 1.11
SNED1Q8TER0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNED1Q8TER0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNED1Q8TER0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNED1Q8TER0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNED1Q8TER0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 AL022326.1-202ENST00000641533 845 ntBASIC21.97■■□□□ 1.11
SNED1Q8TER0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.97■■□□□ 1.11
SNED1Q8TER0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNED1Q8TER0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNED1Q8TER0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.96■■□□□ 1.11
SNED1Q8TER0 AC132938.6-201ENST00000623828 1655 ntBASIC21.96■■□□□ 1.11
SNED1Q8TER0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.96■■□□□ 1.11
SNED1Q8TER0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNED1Q8TER0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNED1Q8TER0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.96■■□□□ 1.11
SNED1Q8TER0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNED1Q8TER0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.96■■□□□ 1.11
SNED1Q8TER0 RFPL4AP1-201ENST00000530883 850 ntBASIC21.96■■□□□ 1.11
SNED1Q8TER0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.96■■□□□ 1.11
SNED1Q8TER0 MTDHP5-201ENST00000598980 586 ntBASIC21.96■■□□□ 1.11
SNED1Q8TER0 AC079781.4-201ENST00000641908 219 ntBASIC21.96■■□□□ 1.11
SNED1Q8TER0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SNED1Q8TER0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SNED1Q8TER0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 AC108751.1-201ENST00000490852 363 ntBASIC21.95■■□□□ 1.1
SNED1Q8TER0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 AC097374.2-201ENST00000618617 1306 ntBASIC21.95■■□□□ 1.1
SNED1Q8TER0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNED1Q8TER0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.95■■□□□ 1.1
SNED1Q8TER0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNED1Q8TER0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SNED1Q8TER0 AC010460.3-201ENST00000511359 1579 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms