Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 AP002414.4-201ENST00000589764 1148 ntBASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 AC124864.1-201ENST00000623408 392 ntBASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 KRT18P1-202ENST00000452408 1331 ntBASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAM1L1Q8N609 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 AC135050.7-201ENST00000624508 2218 ntBASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 AC068472.1-201ENST00000474589 881 ntBASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 REXO1L9P-201ENST00000604264 2108 ntBASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAM1L1Q8N609 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAM1L1Q8N609 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAM1L1Q8N609 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.89■□□□□ 0.46
TRAM1L1Q8N609 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAM1L1Q8N609 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAM1L1Q8N609 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAM1L1Q8N609 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAM1L1Q8N609 DRAXINP1-201ENST00000437611 948 ntBASIC17.89■□□□□ 0.45
TRAM1L1Q8N609 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAM1L1Q8N609 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TRAM1L1Q8N609 MIR3180-1-201ENST00000580374 94 ntBASIC17.89■□□□□ 0.45
TRAM1L1Q8N609 MIR3180-3-201ENST00000584616 94 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms