Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 KRT89P-201ENST00000620027 1478 ntBASIC16.86■□□□□ 0.29
BEST3Q8N1M1 AC009102.3-201ENST00000623118 1491 ntBASIC16.86■□□□□ 0.29
BEST3Q8N1M1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
BEST3Q8N1M1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 MYLKP1-201ENST00000509077 1580 ntBASIC16.85■□□□□ 0.29
BEST3Q8N1M1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 TPM4P1-201ENST00000436100 807 ntBASIC16.85■□□□□ 0.29
BEST3Q8N1M1 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 AL353692.3-201ENST00000407031 1396 ntBASIC16.85■□□□□ 0.29
BEST3Q8N1M1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 AC112777.1-201ENST00000540175 1423 ntBASIC16.85■□□□□ 0.29
BEST3Q8N1M1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST3Q8N1M1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 AL499627.1-201ENST00000569373 2188 ntBASIC16.84■□□□□ 0.29
BEST3Q8N1M1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 GUSBP12-201ENST00000513727 720 ntBASIC16.84■□□□□ 0.29
BEST3Q8N1M1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 AL592071.1-201ENST00000611956 408 ntBASIC16.84■□□□□ 0.29
BEST3Q8N1M1 AC007613.1-201ENST00000572811 2597 ntBASIC16.84■□□□□ 0.29
BEST3Q8N1M1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BEST3Q8N1M1 BCL2-203ENST00000589955 5011 ntBASIC16.84■□□□□ 0.29
BEST3Q8N1M1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
BEST3Q8N1M1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 NUS1P1-201ENST00000446295 882 ntBASIC16.83■□□□□ 0.28
BEST3Q8N1M1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms