Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 DNAJB3-201ENST00000446806 729 ntBASIC17■□□□□ 0.31
COL27A1Q8IZC6 KRT18P2-201ENST00000447938 1258 ntBASIC17■□□□□ 0.31
COL27A1Q8IZC6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 AC027796.2-201ENST00000575326 344 ntBASIC17■□□□□ 0.31
COL27A1Q8IZC6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17■□□□□ 0.31
COL27A1Q8IZC6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL27A1Q8IZC6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC136632.2-201ENST00000512891 861 ntBASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AL353593.2-201ENST00000602529 1483 ntBASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC004817.3-201ENST00000602957 2129 ntBASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC097374.2-201ENST00000618617 1306 ntBASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC073130.3-201ENST00000624389 2278 ntBASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 AC064836.3-201ENST00000607928 673 ntBASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
COL27A1Q8IZC6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 GMCL1P1-201ENST00000463439 1581 ntBASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 AC006557.2-201ENST00000592985 1240 ntBASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 MIR1199-201ENST00000621445 119 ntBASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 AC116562.4-201ENST00000641316 2276 ntBASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
COL27A1Q8IZC6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 NCF1C-201ENST00000438382 1427 ntBASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.97■□□□□ 0.31
COL27A1Q8IZC6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms