Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC092119.3-201ENST00000612618 583 ntBASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 AC016734.2-201ENST00000624325 1377 ntBASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 CHCHD2P8-201ENST00000429873 447 ntBASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM48Q8IWZ4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 KRT18P1-202ENST00000452408 1331 ntBASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 AC092329.2-201ENST00000598402 547 ntBASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 AL390719.2-201ENST00000606993 987 ntBASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM48Q8IWZ4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 IGHGP-201ENST00000390555 1178 ntBASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 KRT89P-201ENST00000620027 1478 ntBASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms