Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
APLFQ8IW19 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
APLFQ8IW19 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.02■□□□□ 0.48
APLFQ8IW19 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
APLFQ8IW19 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
APLFQ8IW19 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
APLFQ8IW19 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
APLFQ8IW19 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.02■□□□□ 0.48
APLFQ8IW19 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APLFQ8IW19 UPK3BP1-201ENST00000428678 509 ntBASIC18.02■□□□□ 0.48
APLFQ8IW19 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.02■□□□□ 0.48
APLFQ8IW19 AC007663.1-201ENST00000438948 1240 ntBASIC18.02■□□□□ 0.48
APLFQ8IW19 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.02■□□□□ 0.48
APLFQ8IW19 AL512604.3-201ENST00000569583 964 ntBASIC18.02■□□□□ 0.48
APLFQ8IW19 AC139887.4-201ENST00000607877 719 ntBASIC18.02■□□□□ 0.48
APLFQ8IW19 AL358472.4-201ENST00000633140 710 ntBASIC18.02■□□□□ 0.48
APLFQ8IW19 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.02■□□□□ 0.48
APLFQ8IW19 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.02■□□□□ 0.47
APLFQ8IW19 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
APLFQ8IW19 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APLFQ8IW19 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
APLFQ8IW19 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APLFQ8IW19 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
APLFQ8IW19 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
APLFQ8IW19 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
APLFQ8IW19 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
APLFQ8IW19 AC134043.2-201ENST00000624206 2238 ntBASIC18.02■□□□□ 0.47
APLFQ8IW19 AL645608.8-201ENST00000606034 2086 ntBASIC18.02■□□□□ 0.47
APLFQ8IW19 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APLFQ8IW19 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
APLFQ8IW19 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
APLFQ8IW19 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
APLFQ8IW19 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.01■□□□□ 0.47
APLFQ8IW19 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
APLFQ8IW19 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 AC092338.2-201ENST00000568827 1415 ntBASIC18.01■□□□□ 0.47
APLFQ8IW19 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
APLFQ8IW19 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 TSPY5P-201ENST00000426936 936 ntBASIC18.01■□□□□ 0.47
APLFQ8IW19 TSPY17P-201ENST00000450329 467 ntBASIC18.01■□□□□ 0.47
APLFQ8IW19 COX11P1-201ENST00000489116 835 ntBASIC18.01■□□□□ 0.47
APLFQ8IW19 YBX1P2-201ENST00000489612 999 ntBASIC18.01■□□□□ 0.47
APLFQ8IW19 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.01■□□□□ 0.47
APLFQ8IW19 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.01■□□□□ 0.47
APLFQ8IW19 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.01■□□□□ 0.47
APLFQ8IW19 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
APLFQ8IW19 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APLFQ8IW19 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.01■□□□□ 0.47
APLFQ8IW19 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
APLFQ8IW19 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18■□□□□ 0.47
APLFQ8IW19 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18■□□□□ 0.47
APLFQ8IW19 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
APLFQ8IW19 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
APLFQ8IW19 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
APLFQ8IW19 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
APLFQ8IW19 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18■□□□□ 0.47
APLFQ8IW19 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18■□□□□ 0.47
APLFQ8IW19 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18■□□□□ 0.47
APLFQ8IW19 AL031133.1-201ENST00000406807 723 ntBASIC18■□□□□ 0.47
APLFQ8IW19 Z85996.1-201ENST00000494644 937 ntBASIC18■□□□□ 0.47
APLFQ8IW19 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
APLFQ8IW19 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms