Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 UNC93B7-201ENST00000509439 705 ntBASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 AC011467.2-201ENST00000598425 242 ntBASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.26■□□□□ 0.83
NIPA1Q7RTP0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 TP73-AS1-210ENST00000637775 1455 ntBASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 AC096633.1-201ENST00000422446 749 ntBASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.25■□□□□ 0.83
NIPA1Q7RTP0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 KRT8P47-201ENST00000604727 1398 ntBASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 AC009113.1-201ENST00000570267 2443 ntBASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 AC096582.2-201ENST00000510860 516 ntBASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 IFNL4P1-201ENST00000607083 540 ntBASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPA1Q7RTP0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPA1Q7RTP0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms