Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 AL031598.1-201ENST00000561511 1773 ntBASIC9.81□□□□□ -0.84
LCA10Q71F78 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 AC009237.14-201ENST00000609975 1594 ntBASIC9.81□□□□□ -0.84
LCA10Q71F78 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC9.81□□□□□ -0.84
LCA10Q71F78 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 BMP1-204ENST00000397814 836 ntTSL 4 BASIC9.81□□□□□ -0.84
LCA10Q71F78 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC9.81□□□□□ -0.84
LCA10Q71F78 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC9.81□□□□□ -0.84
LCA10Q71F78 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC9.81□□□□□ -0.84
LCA10Q71F78 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LCA10Q71F78 KRT16P6-202ENST00000425692 1426 ntBASIC9.81□□□□□ -0.84
LCA10Q71F78 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LCA10Q71F78 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LCA10Q71F78 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LCA10Q71F78 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC9.8□□□□□ -0.84
LCA10Q71F78 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 MIR638-201ENST00000385237 100 ntBASIC9.8□□□□□ -0.84
LCA10Q71F78 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC9.8□□□□□ -0.84
LCA10Q71F78 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC9.8□□□□□ -0.84
LCA10Q71F78 TERF1P5-201ENST00000477545 1207 ntBASIC9.8□□□□□ -0.84
LCA10Q71F78 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC9.8□□□□□ -0.84
LCA10Q71F78 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 TFG-210ENST00000620299 1289 ntTSL 5 BASIC9.8□□□□□ -0.84
LCA10Q71F78 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LCA10Q71F78 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 KRT8P17-201ENST00000453110 1448 ntBASIC9.8□□□□□ -0.84
LCA10Q71F78 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC9.8□□□□□ -0.84
LCA10Q71F78 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC9.8□□□□□ -0.84
LCA10Q71F78 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LCA10Q71F78 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms