Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.06■□□□□ 0
VPS13CQ709C8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.06■□□□□ 0
VPS13CQ709C8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
VPS13CQ709C8 AC108751.1-201ENST00000490852 363 ntBASIC15.06■□□□□ 0
VPS13CQ709C8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VPS13CQ709C8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VPS13CQ709C8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
VPS13CQ709C8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
VPS13CQ709C8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.05■□□□□ 0
VPS13CQ709C8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
VPS13CQ709C8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.05■□□□□ 0
VPS13CQ709C8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.05■□□□□ 0
VPS13CQ709C8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.05■□□□□ 0
VPS13CQ709C8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
VPS13CQ709C8 BCRP1-201ENST00000444246 691 ntBASIC15.05■□□□□ 0
VPS13CQ709C8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
VPS13CQ709C8 ELL2P1-201ENST00000413990 1906 ntBASIC15.05■□□□□ 0
VPS13CQ709C8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.05■□□□□ 0
VPS13CQ709C8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.05■□□□□ -0
VPS13CQ709C8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VPS13CQ709C8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.05■□□□□ -0
VPS13CQ709C8 ABCD1P5-201ENST00000445663 754 ntBASIC15.05■□□□□ -0
VPS13CQ709C8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.05■□□□□ -0
VPS13CQ709C8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.05■□□□□ -0
VPS13CQ709C8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.05■□□□□ -0
VPS13CQ709C8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.05■□□□□ -0
VPS13CQ709C8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.05■□□□□ -0
VPS13CQ709C8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VPS13CQ709C8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.05■□□□□ -0
VPS13CQ709C8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.05■□□□□ -0
VPS13CQ709C8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.05■□□□□ -0
VPS13CQ709C8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.05■□□□□ -0
VPS13CQ709C8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.05■□□□□ -0
VPS13CQ709C8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.05■□□□□ -0
VPS13CQ709C8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.05■□□□□ -0
VPS13CQ709C8 AL513190.1-201ENST00000621254 727 ntBASIC15.05■□□□□ -0
VPS13CQ709C8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
VPS13CQ709C8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13CQ709C8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.05■□□□□ -0
VPS13CQ709C8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.04■□□□□ -0
VPS13CQ709C8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.04■□□□□ -0
VPS13CQ709C8 MTDHP4-201ENST00000600287 670 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 AC008735.5-201ENST00000623544 497 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 AL139288.1-201ENST00000623748 933 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 AC112777.1-201ENST00000540175 1423 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.04■□□□□ -0
VPS13CQ709C8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 COX20P2-201ENST00000452636 358 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 RNA5SP416-201ENST00000516838 111 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 AC027612.4-201ENST00000605371 583 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 MIR1199-201ENST00000621445 119 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 AC132938.6-201ENST00000623828 1655 ntBASIC15.04■□□□□ -0
VPS13CQ709C8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VPS13CQ709C8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
VPS13CQ709C8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.04■□□□□ -0
VPS13CQ709C8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13CQ709C8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.04■□□□□ -0
VPS13CQ709C8 AL161938.1-201ENST00000569833 2180 ntBASIC15.03■□□□□ -0
VPS13CQ709C8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13CQ709C8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.03■□□□□ -0
VPS13CQ709C8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13CQ709C8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms