Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 PHGDH-209ENST00000641074 1780 ntBASIC17.58■□□□□ 0.4
HIST2H2AA3Q6FI13 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.58■□□□□ 0.4
HIST2H2AA3Q6FI13 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 AC211429.1-201ENST00000415277 523 ntBASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 BX664615.1-201ENST00000443558 458 ntBASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 GCSHP2-201ENST00000560971 527 ntBASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 REXO1L9P-201ENST00000604264 2108 ntBASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H2AA3Q6FI13 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 AL023973.1-201ENST00000624619 620 ntBASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 AL157888.1-201ENST00000631930 593 ntBASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 AL096828.2-201ENST00000567259 1965 ntBASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H2AA3Q6FI13 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 TERF1P1-201ENST00000311003 1181 ntBASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 PVRIG2P-201ENST00000435460 978 ntBASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 NOC2LP1-202ENST00000452600 2235 ntBASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 LETM1P2-201ENST00000597330 2178 ntBASIC17.55■□□□□ 0.4
HIST2H2AA3Q6FI13 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms