Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 C2orf69P3-201ENST00000565542 1120 ntBASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKAL1Q5VV42 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 AL355075.4-201ENST00000554988 638 ntBASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKAL1Q5VV42 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 AC133963.1-201ENST00000504166 1679 ntBASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 EGLN1P1-201ENST00000531623 762 ntBASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKAL1Q5VV42 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 PCDHA12-202ENST00000613593 2588 ntBASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKAL1Q5VV42 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDKAL1Q5VV42 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms