Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 RHOQP3-201ENST00000437982 621 ntBASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 AC004706.3-202ENST00000621574 984 ntBASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 SMG8-203ENST00000578922 2178 ntBASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRPF38BQ5VTL8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 ELK2AP-201ENST00000392510 1007 ntBASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 AC140878.1-201ENST00000565277 250 ntBASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 AC007064.4-201ENST00000637740 555 ntBASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF38BQ5VTL8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 TREML5P-201ENST00000421694 576 ntBASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 AC006504.4-201ENST00000592118 1568 ntBASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF38BQ5VTL8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 AC244015.2-201ENST00000616358 1861 ntBASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.54■□□□□ 0.72
PRPF38BQ5VTL8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms