Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.18■□□□□ 0.98
CERKLQ49MI3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CERKLQ49MI3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CERKLQ49MI3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CERKLQ49MI3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CERKLQ49MI3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CERKLQ49MI3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CERKLQ49MI3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.18■□□□□ 0.98
CERKLQ49MI3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 AL022342.1-201ENST00000400363 863 ntBASIC21.17■□□□□ 0.98
CERKLQ49MI3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 AL355877.3-201ENST00000622820 899 ntBASIC21.17■□□□□ 0.98
CERKLQ49MI3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CERKLQ49MI3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CERKLQ49MI3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.16■□□□□ 0.98
CERKLQ49MI3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.16■□□□□ 0.98
CERKLQ49MI3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CERKLQ49MI3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.16■□□□□ 0.98
CERKLQ49MI3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.16■□□□□ 0.98
CERKLQ49MI3 AL773604.1-201ENST00000617417 272 ntBASIC21.16■□□□□ 0.98
CERKLQ49MI3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CERKLQ49MI3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 MTDHP3-201ENST00000594186 672 ntBASIC21.15■□□□□ 0.98
CERKLQ49MI3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 AP001269.4-201ENST00000609611 512 ntBASIC21.15■□□□□ 0.98
CERKLQ49MI3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CERKLQ49MI3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.15■□□□□ 0.98
CERKLQ49MI3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CERKLQ49MI3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CERKLQ49MI3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.14■□□□□ 0.98
CERKLQ49MI3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.14■□□□□ 0.98
CERKLQ49MI3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CERKLQ49MI3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CERKLQ49MI3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CERKLQ49MI3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CERKLQ49MI3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.14■□□□□ 0.98
CERKLQ49MI3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CERKLQ49MI3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKLQ49MI3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKLQ49MI3 AC073592.3-201ENST00000625118 1834 ntBASIC21.14■□□□□ 0.97
CERKLQ49MI3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKLQ49MI3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKLQ49MI3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CERKLQ49MI3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.14■□□□□ 0.97
CERKLQ49MI3 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.14■□□□□ 0.97
CERKLQ49MI3 RBM17P3-201ENST00000417687 1192 ntBASIC21.14■□□□□ 0.97
CERKLQ49MI3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CERKLQ49MI3 KRT18P67-201ENST00000432816 1264 ntBASIC21.14■□□□□ 0.97
CERKLQ49MI3 RNA5SP419-201ENST00000515908 135 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms