Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-BQ31612 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-BQ31612 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-BQ31612 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-BQ31612 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-BQ31612 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-BQ31612 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 RPS8P6-201ENST00000426177 609 ntBASIC17.57■□□□□ 0.4
HLA-BQ31612 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.57■□□□□ 0.4
HLA-BQ31612 DNAJB3-201ENST00000446806 729 ntBASIC17.57■□□□□ 0.4
HLA-BQ31612 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.57■□□□□ 0.4
HLA-BQ31612 RNA5SP416-201ENST00000516838 111 ntBASIC17.57■□□□□ 0.4
HLA-BQ31612 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-BQ31612 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-BQ31612 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.57■□□□□ 0.4
HLA-BQ31612 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-BQ31612 AL139424.1-201ENST00000607572 797 ntBASIC17.57■□□□□ 0.4
HLA-BQ31612 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.57■□□□□ 0.4
HLA-BQ31612 AP000867.4-201ENST00000641616 219 ntBASIC17.57■□□□□ 0.4
HLA-BQ31612 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-BQ31612 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-BQ31612 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.57■□□□□ 0.4
HLA-BQ31612 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-BQ31612 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-BQ31612 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-BQ31612 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-BQ31612 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HLA-BQ31612 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-BQ31612 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.56■□□□□ 0.4
HLA-BQ31612 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-BQ31612 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-BQ31612 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-BQ31612 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-BQ31612 AP001160.2-201ENST00000596071 487 ntBASIC17.56■□□□□ 0.4
HLA-BQ31612 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-BQ31612 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-BQ31612 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
HLA-BQ31612 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-BQ31612 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-BQ31612 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-BQ31612 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
HLA-BQ31612 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-BQ31612 LAGE3P1-201ENST00000425356 484 ntBASIC17.55■□□□□ 0.4
HLA-BQ31612 AC007967.2-201ENST00000432613 625 ntBASIC17.55■□□□□ 0.4
HLA-BQ31612 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-BQ31612 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-BQ31612 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HLA-BQ31612 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-BQ31612 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-BQ31612 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-BQ31612 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-BQ31612 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-BQ31612 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
HLA-BQ31612 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-BQ31612 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.54■□□□□ 0.4
HLA-BQ31612 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 PMS2P2-201ENST00000425039 1128 ntBASIC17.54■□□□□ 0.4
HLA-BQ31612 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-BQ31612 AC079781.4-201ENST00000641908 219 ntBASIC17.54■□□□□ 0.4
HLA-BQ31612 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-BQ31612 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms