Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCNA1P78396 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.6■□□□□ 0.89
CCNA1P78396 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.6■□□□□ 0.89
CCNA1P78396 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.6■□□□□ 0.89
CCNA1P78396 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.6■□□□□ 0.89
CCNA1P78396 AC005104.2-201ENST00000427818 678 ntBASIC20.6■□□□□ 0.89
CCNA1P78396 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.6■□□□□ 0.89
CCNA1P78396 AC034105.1-201ENST00000563488 319 ntBASIC20.6■□□□□ 0.89
CCNA1P78396 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.6■□□□□ 0.89
CCNA1P78396 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 AL356488.2-201ENST00000602755 427 ntBASIC20.6■□□□□ 0.89
CCNA1P78396 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.6■□□□□ 0.89
CCNA1P78396 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCNA1P78396 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.59■□□□□ 0.89
CCNA1P78396 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.59■□□□□ 0.89
CCNA1P78396 RNA5SP415-201ENST00000517246 115 ntBASIC20.59■□□□□ 0.89
CCNA1P78396 AC105339.3-201ENST00000560043 636 ntBASIC20.59■□□□□ 0.89
CCNA1P78396 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 NKAPP1-205ENST00000585790 367 ntBASIC20.59■□□□□ 0.89
CCNA1P78396 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.59■□□□□ 0.89
CCNA1P78396 MTDHP4-201ENST00000600287 670 ntBASIC20.59■□□□□ 0.89
CCNA1P78396 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNA1P78396 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.59■□□□□ 0.89
CCNA1P78396 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.58■□□□□ 0.89
CCNA1P78396 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.58■□□□□ 0.89
CCNA1P78396 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 SLC25A24-204ENST00000569674 2357 ntBASIC20.58■□□□□ 0.89
CCNA1P78396 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 AL499627.1-201ENST00000569373 2188 ntBASIC20.58■□□□□ 0.89
CCNA1P78396 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.58■□□□□ 0.89
CCNA1P78396 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 AC012640.2-201ENST00000561606 901 ntBASIC20.58■□□□□ 0.89
CCNA1P78396 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCNA1P78396 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.58■□□□□ 0.89
CCNA1P78396 AC107918.4-202ENST00000641623 219 ntBASIC20.58■□□□□ 0.89
CCNA1P78396 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNA1P78396 AC073130.3-201ENST00000624389 2278 ntBASIC20.58■□□□□ 0.88
CCNA1P78396 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNA1P78396 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNA1P78396 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNA1P78396 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.58■□□□□ 0.88
CCNA1P78396 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCNA1P78396 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNA1P78396 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCNA1P78396 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNA1P78396 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNA1P78396 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCNA1P78396 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCNA1P78396 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 KRT18P3-201ENST00000451602 1288 ntBASIC20.57■□□□□ 0.88
CCNA1P78396 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNA1P78396 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNA1P78396 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNA1P78396 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNA1P78396 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.57■□□□□ 0.88
CCNA1P78396 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNA1P78396 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.57■□□□□ 0.88
CCNA1P78396 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCNA1P78396 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.57■□□□□ 0.88
CCNA1P78396 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CCNA1P78396 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNA1P78396 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCNA1P78396 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNA1P78396 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNA1P78396 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNA1P78396 AC097374.2-201ENST00000618617 1306 ntBASIC20.56■□□□□ 0.88
CCNA1P78396 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNA1P78396 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNA1P78396 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNA1P78396 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms