Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.86□□□□□ -0.03
LMO4P61968 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LMO4P61968 AF186996.4-201ENST00000467186 377 ntBASIC14.86□□□□□ -0.03
LMO4P61968 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.86□□□□□ -0.03
LMO4P61968 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.86□□□□□ -0.03
LMO4P61968 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LMO4P61968 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.86□□□□□ -0.03
LMO4P61968 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.86□□□□□ -0.03
LMO4P61968 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
LMO4P61968 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.86□□□□□ -0.03
LMO4P61968 AC148477.8-201ENST00000624298 468 ntBASIC14.86□□□□□ -0.03
LMO4P61968 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LMO4P61968 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LMO4P61968 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMO4P61968 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.86□□□□□ -0.03
LMO4P61968 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMO4P61968 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LMO4P61968 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMO4P61968 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.86□□□□□ -0.03
LMO4P61968 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LMO4P61968 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LMO4P61968 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
LMO4P61968 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LMO4P61968 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.85□□□□□ -0.03
LMO4P61968 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 AL590627.1-203ENST00000421194 1026 ntBASIC14.85□□□□□ -0.03
LMO4P61968 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.85□□□□□ -0.03
LMO4P61968 ABCD1P5-201ENST00000445663 754 ntBASIC14.85□□□□□ -0.03
LMO4P61968 RNPS1P1-201ENST00000507437 918 ntBASIC14.85□□□□□ -0.03
LMO4P61968 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.85□□□□□ -0.03
LMO4P61968 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.85□□□□□ -0.03
LMO4P61968 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.85□□□□□ -0.03
LMO4P61968 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.85□□□□□ -0.03
LMO4P61968 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.85□□□□□ -0.03
LMO4P61968 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.85□□□□□ -0.03
LMO4P61968 AC097374.2-201ENST00000618617 1306 ntBASIC14.85□□□□□ -0.03
LMO4P61968 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 PHGDH-209ENST00000641074 1780 ntBASIC14.85□□□□□ -0.03
LMO4P61968 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.85□□□□□ -0.03
LMO4P61968 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LMO4P61968 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LMO4P61968 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.84□□□□□ -0.03
LMO4P61968 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LMO4P61968 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.84□□□□□ -0.03
LMO4P61968 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.84□□□□□ -0.03
LMO4P61968 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.84□□□□□ -0.03
LMO4P61968 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 AC018712.1-201ENST00000455767 687 ntBASIC14.84□□□□□ -0.03
LMO4P61968 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 AC120114.3-201ENST00000611923 658 ntBASIC14.84□□□□□ -0.03
LMO4P61968 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.84□□□□□ -0.03
LMO4P61968 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.84□□□□□ -0.03
LMO4P61968 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 AC093010.1-201ENST00000473625 1624 ntBASIC14.84□□□□□ -0.03
LMO4P61968 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.84□□□□□ -0.03
LMO4P61968 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.84□□□□□ -0.03
LMO4P61968 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LMO4P61968 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LMO4P61968 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
LMO4P61968 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LMO4P61968 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LMO4P61968 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.83□□□□□ -0.03
LMO4P61968 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO4P61968 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.83□□□□□ -0.04
LMO4P61968 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO4P61968 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.83□□□□□ -0.04
LMO4P61968 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LMO4P61968 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms