Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN12P56749 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN12P56749 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN12P56749 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLDN12P56749 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN12P56749 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN12P56749 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN12P56749 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CLDN12P56749 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN12P56749 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN12P56749 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN12P56749 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN12P56749 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN12P56749 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CLDN12P56749 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 AC239809.2-201ENST00000415381 517 ntBASIC15.81■□□□□ 0.12
CLDN12P56749 AC004951.3-201ENST00000418645 1148 ntBASIC15.81■□□□□ 0.12
CLDN12P56749 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN12P56749 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN12P56749 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.81■□□□□ 0.12
CLDN12P56749 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN12P56749 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLDN12P56749 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN12P56749 AL109923.1-201ENST00000618799 583 ntBASIC15.81■□□□□ 0.12
CLDN12P56749 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN12P56749 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 AC011676.5-201ENST00000624864 2660 ntBASIC15.81■□□□□ 0.12
CLDN12P56749 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN12P56749 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 CROCCP1-201ENST00000426910 5675 ntBASIC15.8■□□□□ 0.12
CLDN12P56749 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLDN12P56749 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 NKILA-202ENST00000614771 2598 ntBASIC15.8■□□□□ 0.12
CLDN12P56749 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN12P56749 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN12P56749 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms