Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN8P56748 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN8P56748 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN8P56748 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN8P56748 KRT17P2-201ENST00000300992 1314 ntBASIC17.27■□□□□ 0.36
CLDN8P56748 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN8P56748 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN8P56748 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN8P56748 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CLDN8P56748 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN8P56748 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN8P56748 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN8P56748 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN8P56748 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN8P56748 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN8P56748 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN8P56748 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.27■□□□□ 0.35
CLDN8P56748 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLDN8P56748 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CLDN8P56748 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CLDN8P56748 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN8P56748 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLDN8P56748 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.26■□□□□ 0.35
CLDN8P56748 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN8P56748 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN8P56748 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN8P56748 SEC1P-202ENST00000473944 940 ntBASIC17.26■□□□□ 0.35
CLDN8P56748 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN8P56748 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN8P56748 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN8P56748 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN8P56748 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN8P56748 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN8P56748 AL355075.4-201ENST00000554988 638 ntBASIC17.26■□□□□ 0.35
CLDN8P56748 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN8P56748 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN8P56748 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLDN8P56748 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN8P56748 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN8P56748 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN8P56748 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLDN8P56748 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN8P56748 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 INGX-201ENST00000359239 846 ntBASIC17.25■□□□□ 0.35
CLDN8P56748 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
CLDN8P56748 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN8P56748 AC128688.1-201ENST00000487626 519 ntBASIC17.25■□□□□ 0.35
CLDN8P56748 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN8P56748 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN8P56748 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN8P56748 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN8P56748 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN8P56748 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN8P56748 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms