Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH4P55283 AC246785.2-201ENST00000432512 513 ntBASIC18.52■□□□□ 0.56
CDH4P55283 LINC00265-3P-201ENST00000447588 903 ntBASIC18.52■□□□□ 0.56
CDH4P55283 VENTXP7-201ENST00000475503 772 ntBASIC18.52■□□□□ 0.56
CDH4P55283 KRT18P56-201ENST00000507275 550 ntBASIC18.52■□□□□ 0.56
CDH4P55283 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH4P55283 DUTP2-201ENST00000519164 463 ntBASIC18.52■□□□□ 0.56
CDH4P55283 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH4P55283 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH4P55283 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH4P55283 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CDH4P55283 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.52■□□□□ 0.56
CDH4P55283 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDH4P55283 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH4P55283 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH4P55283 AL020996.1-203ENST00000536896 2307 ntBASIC18.52■□□□□ 0.56
CDH4P55283 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH4P55283 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH4P55283 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH4P55283 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CDH4P55283 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.52■□□□□ 0.55
CDH4P55283 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH4P55283 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CDH4P55283 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.52■□□□□ 0.55
CDH4P55283 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CDH4P55283 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.52■□□□□ 0.55
CDH4P55283 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.52■□□□□ 0.55
CDH4P55283 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CDH4P55283 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH4P55283 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH4P55283 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH4P55283 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH4P55283 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CDH4P55283 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH4P55283 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH4P55283 MTCL1P1-201ENST00000446207 792 ntBASIC18.51■□□□□ 0.55
CDH4P55283 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH4P55283 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH4P55283 Z69720.1-201ENST00000601483 472 ntBASIC18.51■□□□□ 0.55
CDH4P55283 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.51■□□□□ 0.55
CDH4P55283 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH4P55283 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 AC233702.3-201ENST00000578656 1387 ntBASIC18.51■□□□□ 0.55
CDH4P55283 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH4P55283 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH4P55283 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH4P55283 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH4P55283 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CDH4P55283 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH4P55283 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH4P55283 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CDH4P55283 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH4P55283 AL845331.1-201ENST00000424978 1190 ntBASIC18.5■□□□□ 0.55
CDH4P55283 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH4P55283 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CDH4P55283 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH4P55283 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH4P55283 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH4P55283 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH4P55283 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH4P55283 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH4P55283 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH4P55283 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDH4P55283 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms