Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 AL138781.2-201ENST00000617896 1843 ntBASIC19.22■□□□□ 0.67
CACNA2D1P54289 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 KRT18P1-202ENST00000452408 1331 ntBASIC19.22■□□□□ 0.67
CACNA2D1P54289 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 RN7SL606P-201ENST00000472779 293 ntBASIC19.21■□□□□ 0.67
CACNA2D1P54289 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CACNA2D1P54289 CLEC4GP1-201ENST00000596555 870 ntBASIC19.21■□□□□ 0.67
CACNA2D1P54289 AC092329.2-201ENST00000598402 547 ntBASIC19.21■□□□□ 0.67
CACNA2D1P54289 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA2D1P54289 AC104581.1-202ENST00000635932 2618 ntBASIC19.21■□□□□ 0.66
CACNA2D1P54289 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CACNA2D1P54289 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 DUSP5P1-201ENST00000441325 1139 ntBASIC19.2■□□□□ 0.66
CACNA2D1P54289 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.2■□□□□ 0.66
CACNA2D1P54289 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA2D1P54289 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA2D1P54289 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 AL845331.1-201ENST00000424978 1190 ntBASIC19.19■□□□□ 0.66
CACNA2D1P54289 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 AC091607.1-201ENST00000490318 1060 ntBASIC19.19■□□□□ 0.66
CACNA2D1P54289 AC113404.2-201ENST00000507884 177 ntBASIC19.19■□□□□ 0.66
CACNA2D1P54289 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 AL592071.1-201ENST00000611956 408 ntBASIC19.19■□□□□ 0.66
CACNA2D1P54289 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA2D1P54289 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CACNA2D1P54289 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms