Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VEGFBP49765 AC023141.13-201ENST00000604991 943 ntBASIC20.75■□□□□ 0.91
VEGFBP49765 AL353135.1-201ENST00000606729 504 ntBASIC20.75■□□□□ 0.91
VEGFBP49765 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
VEGFBP49765 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.75■□□□□ 0.91
VEGFBP49765 AC007064.4-201ENST00000637740 555 ntBASIC20.75■□□□□ 0.91
VEGFBP49765 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VEGFBP49765 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VEGFBP49765 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VEGFBP49765 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.74■□□□□ 0.91
VEGFBP49765 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VEGFBP49765 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.74■□□□□ 0.91
VEGFBP49765 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.74■□□□□ 0.91
VEGFBP49765 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.74■□□□□ 0.91
VEGFBP49765 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 CNN2P2-201ENST00000443536 909 ntBASIC20.74■□□□□ 0.91
VEGFBP49765 CNN2P3-201ENST00000450201 906 ntBASIC20.74■□□□□ 0.91
VEGFBP49765 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VEGFBP49765 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.74■□□□□ 0.91
VEGFBP49765 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.74■□□□□ 0.91
VEGFBP49765 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.74■□□□□ 0.91
VEGFBP49765 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.74■□□□□ 0.91
VEGFBP49765 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
VEGFBP49765 AC084346.2-201ENST00000607097 949 ntBASIC20.74■□□□□ 0.91
VEGFBP49765 AL136317.3-201ENST00000618497 906 ntBASIC20.74■□□□□ 0.91
VEGFBP49765 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.74■□□□□ 0.91
VEGFBP49765 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
VEGFBP49765 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VEGFBP49765 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
VEGFBP49765 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.73■□□□□ 0.91
VEGFBP49765 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.73■□□□□ 0.91
VEGFBP49765 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFBP49765 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VEGFBP49765 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFBP49765 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.73■□□□□ 0.91
VEGFBP49765 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.73■□□□□ 0.91
VEGFBP49765 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.73■□□□□ 0.91
VEGFBP49765 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.73■□□□□ 0.91
VEGFBP49765 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
VEGFBP49765 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFBP49765 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.73■□□□□ 0.91
VEGFBP49765 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VEGFBP49765 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.73■□□□□ 0.91
VEGFBP49765 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
VEGFBP49765 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VEGFBP49765 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VEGFBP49765 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.72■□□□□ 0.91
VEGFBP49765 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VEGFBP49765 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFBP49765 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.72■□□□□ 0.91
VEGFBP49765 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.72■□□□□ 0.91
VEGFBP49765 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
VEGFBP49765 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFBP49765 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.72■□□□□ 0.91
VEGFBP49765 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFBP49765 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFBP49765 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFBP49765 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VEGFBP49765 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
VEGFBP49765 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.71■□□□□ 0.91
VEGFBP49765 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.71■□□□□ 0.91
VEGFBP49765 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.71■□□□□ 0.91
VEGFBP49765 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 ARSEP1-201ENST00000420443 635 ntBASIC20.71■□□□□ 0.91
VEGFBP49765 DDX43P3-201ENST00000441064 443 ntBASIC20.71■□□□□ 0.91
VEGFBP49765 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
VEGFBP49765 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
VEGFBP49765 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.71■□□□□ 0.91
VEGFBP49765 AL596325.1-201ENST00000563991 1082 ntBASIC20.71■□□□□ 0.91
VEGFBP49765 OR7E47P-204ENST00000575924 449 ntBASIC20.71■□□□□ 0.91
VEGFBP49765 AC027307.3-201ENST00000594262 1100 ntBASIC20.71■□□□□ 0.91
VEGFBP49765 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.71■□□□□ 0.91
VEGFBP49765 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.71■□□□□ 0.91
VEGFBP49765 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
VEGFBP49765 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.71■□□□□ 0.91
VEGFBP49765 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VEGFBP49765 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.71■□□□□ 0.91
VEGFBP49765 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFBP49765 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFBP49765 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFBP49765 SDHAP2-201ENST00000455183 2001 ntBASIC20.7■□□□□ 0.9
VEGFBP49765 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms