Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TNNI2P48788 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TNNI2P48788 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
TNNI2P48788 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
TNNI2P48788 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.52■■□□□ 1.04
TNNI2P48788 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TNNI2P48788 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.52■■□□□ 1.04
TNNI2P48788 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.52■■□□□ 1.04
TNNI2P48788 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TNNI2P48788 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.52■■□□□ 1.04
TNNI2P48788 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.52■■□□□ 1.04
TNNI2P48788 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.52■■□□□ 1.04
TNNI2P48788 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.52■■□□□ 1.04
TNNI2P48788 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.52■■□□□ 1.04
TNNI2P48788 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 AP005117.1-201ENST00000584346 1413 ntBASIC21.52■■□□□ 1.04
TNNI2P48788 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNNI2P48788 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TNNI2P48788 AC099343.3-201ENST00000605834 2503 ntBASIC21.52■■□□□ 1.03
TNNI2P48788 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TNNI2P48788 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TNNI2P48788 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.52■■□□□ 1.03
TNNI2P48788 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TNNI2P48788 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TNNI2P48788 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 LINC00602-201ENST00000629776 2065 ntBASIC21.51■■□□□ 1.03
TNNI2P48788 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.51■■□□□ 1.03
TNNI2P48788 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.51■■□□□ 1.03
TNNI2P48788 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 HNRNPDP1-201ENST00000439535 754 ntBASIC21.51■■□□□ 1.03
TNNI2P48788 KRT18P65-201ENST00000439811 1286 ntBASIC21.51■■□□□ 1.03
TNNI2P48788 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.51■■□□□ 1.03
TNNI2P48788 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.51■■□□□ 1.03
TNNI2P48788 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 AC116407.3-201ENST00000623905 1129 ntBASIC21.51■■□□□ 1.03
TNNI2P48788 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.51■■□□□ 1.03
TNNI2P48788 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
TNNI2P48788 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.51■■□□□ 1.03
TNNI2P48788 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNNI2P48788 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.5■■□□□ 1.03
TNNI2P48788 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 MIR940-201ENST00000401276 94 ntBASIC21.5■■□□□ 1.03
TNNI2P48788 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.5■■□□□ 1.03
TNNI2P48788 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.5■■□□□ 1.03
TNNI2P48788 ABCD1P5-201ENST00000445663 754 ntBASIC21.5■■□□□ 1.03
TNNI2P48788 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.5■■□□□ 1.03
TNNI2P48788 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.5■■□□□ 1.03
TNNI2P48788 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.5■■□□□ 1.03
TNNI2P48788 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.5■■□□□ 1.03
TNNI2P48788 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.5■■□□□ 1.03
TNNI2P48788 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.5■■□□□ 1.03
TNNI2P48788 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
TNNI2P48788 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TNNI2P48788 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNNI2P48788 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TNNI2P48788 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI2P48788 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI2P48788 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TNNI2P48788 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI2P48788 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI2P48788 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI2P48788 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.49■■□□□ 1.03
TNNI2P48788 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.49■■□□□ 1.03
TNNI2P48788 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.49■■□□□ 1.03
TNNI2P48788 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.49■■□□□ 1.03
TNNI2P48788 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI2P48788 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms