Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
TM4SF4P48230 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF4P48230 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF4P48230 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.6■□□□□ 0.89
TM4SF4P48230 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TM4SF4P48230 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 AC096734.2-201ENST00000562054 433 ntBASIC20.6■□□□□ 0.89
TM4SF4P48230 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.6■□□□□ 0.89
TM4SF4P48230 AC005498.2-205ENST00000593218 784 ntBASIC20.6■□□□□ 0.89
TM4SF4P48230 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 AL513210.1-201ENST00000629608 234 ntBASIC20.6■□□□□ 0.89
TM4SF4P48230 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TM4SF4P48230 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TM4SF4P48230 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.59■□□□□ 0.89
TM4SF4P48230 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TM4SF4P48230 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF4P48230 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF4P48230 AC103564.2-201ENST00000432853 1299 ntBASIC20.59■□□□□ 0.89
TM4SF4P48230 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF4P48230 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF4P48230 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.59■□□□□ 0.89
TM4SF4P48230 KRT19P2-202ENST00000557173 1012 ntBASIC20.59■□□□□ 0.89
TM4SF4P48230 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.59■□□□□ 0.89
TM4SF4P48230 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.59■□□□□ 0.89
TM4SF4P48230 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF4P48230 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF4P48230 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF4P48230 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.58■□□□□ 0.89
TM4SF4P48230 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TM4SF4P48230 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TM4SF4P48230 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.58■□□□□ 0.89
TM4SF4P48230 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.58■□□□□ 0.89
TM4SF4P48230 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.58■□□□□ 0.89
TM4SF4P48230 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.58■□□□□ 0.89
TM4SF4P48230 AL020989.1-201ENST00000422979 469 ntBASIC20.58■□□□□ 0.89
TM4SF4P48230 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.58■□□□□ 0.89
TM4SF4P48230 FAM58CP-201ENST00000435741 640 ntBASIC20.58■□□□□ 0.89
TM4SF4P48230 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.58■□□□□ 0.89
TM4SF4P48230 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.58■□□□□ 0.89
TM4SF4P48230 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TM4SF4P48230 AC025678.2-201ENST00000562061 970 ntBASIC20.58■□□□□ 0.89
TM4SF4P48230 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TM4SF4P48230 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TM4SF4P48230 AC010654.1-201ENST00000615722 808 ntBASIC20.58■□□□□ 0.89
TM4SF4P48230 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.58■□□□□ 0.89
TM4SF4P48230 AC073592.5-201ENST00000624854 528 ntBASIC20.58■□□□□ 0.89
TM4SF4P48230 LINC01006-201ENST00000333319 2292 ntBASIC20.58■□□□□ 0.88
TM4SF4P48230 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF4P48230 AC010460.3-201ENST00000511359 1579 ntBASIC20.58■□□□□ 0.88
TM4SF4P48230 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
TM4SF4P48230 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF4P48230 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF4P48230 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TM4SF4P48230 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.58■□□□□ 0.88
TM4SF4P48230 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.58■□□□□ 0.88
TM4SF4P48230 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.58■□□□□ 0.88
TM4SF4P48230 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.57■□□□□ 0.88
TM4SF4P48230 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.57■□□□□ 0.88
TM4SF4P48230 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TM4SF4P48230 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TM4SF4P48230 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.57■□□□□ 0.88
TM4SF4P48230 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 RHOQP3-201ENST00000437982 621 ntBASIC20.57■□□□□ 0.88
TM4SF4P48230 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.57■□□□□ 0.88
TM4SF4P48230 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms