Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.51■□□□□ 0.23
NR4A2P43354 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 AC018553.1-201ENST00000616682 1458 ntBASIC16.51■□□□□ 0.23
NR4A2P43354 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.51■□□□□ 0.23
NR4A2P43354 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.51■□□□□ 0.23
NR4A2P43354 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.51■□□□□ 0.23
NR4A2P43354 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 AC005363.2-201ENST00000618631 242 ntBASIC16.51■□□□□ 0.23
NR4A2P43354 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
NR4A2P43354 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A2P43354 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
NR4A2P43354 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.5■□□□□ 0.23
NR4A2P43354 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.5■□□□□ 0.23
NR4A2P43354 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NR4A2P43354 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.5■□□□□ 0.23
NR4A2P43354 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NR4A2P43354 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NR4A2P43354 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.5■□□□□ 0.23
NR4A2P43354 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.5■□□□□ 0.23
NR4A2P43354 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.5■□□□□ 0.23
NR4A2P43354 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.5■□□□□ 0.23
NR4A2P43354 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.5■□□□□ 0.23
NR4A2P43354 RN7SL850P-201ENST00000579959 291 ntBASIC16.5■□□□□ 0.23
NR4A2P43354 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.5■□□□□ 0.23
NR4A2P43354 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.5■□□□□ 0.23
NR4A2P43354 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NR4A2P43354 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.5■□□□□ 0.23
NR4A2P43354 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NR4A2P43354 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 KRT8P9-201ENST00000558927 1449 ntBASIC16.5■□□□□ 0.23
NR4A2P43354 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.5■□□□□ 0.23
NR4A2P43354 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.5■□□□□ 0.23
NR4A2P43354 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NR4A2P43354 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NR4A2P43354 GNAS-203ENST00000306120 1878 ntBASIC16.5■□□□□ 0.23
NR4A2P43354 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
NR4A2P43354 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A2P43354 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NR4A2P43354 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NR4A2P43354 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NR4A2P43354 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.49■□□□□ 0.23
NR4A2P43354 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 FITM1-202ENST00000559294 800 ntBASIC16.49■□□□□ 0.23
NR4A2P43354 NAPSB-206ENST00000562112 1266 ntBASIC16.49■□□□□ 0.23
NR4A2P43354 C1QL1P1-201ENST00000568105 661 ntBASIC16.49■□□□□ 0.23
NR4A2P43354 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
NR4A2P43354 UBALD1-205ENST00000590891 2641 ntBASIC16.49■□□□□ 0.23
NR4A2P43354 AC116351.2-201ENST00000606540 1585 ntBASIC16.49■□□□□ 0.23
NR4A2P43354 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NR4A2P43354 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 AL031985.4-201ENST00000642138 673 ntBASIC16.49■□□□□ 0.23
NR4A2P43354 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR4A2P43354 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms