Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXD13P35453 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 KRT18P55-202ENST00000578578 1546 ntBASIC19.82■□□□□ 0.76
HOXD13P35453 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXD13P35453 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD13P35453 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXD13P35453 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
HOXD13P35453 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD13P35453 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HOXD13P35453 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD13P35453 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXD13P35453 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXD13P35453 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.82■□□□□ 0.76
HOXD13P35453 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXD13P35453 AC005332.8-201ENST00000622750 2735 ntBASIC19.82■□□□□ 0.76
HOXD13P35453 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXD13P35453 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD13P35453 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD13P35453 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD13P35453 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXD13P35453 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXD13P35453 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXD13P35453 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXD13P35453 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXD13P35453 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD13P35453 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD13P35453 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD13P35453 FAM86EP-206ENST00000510506 987 ntBASIC19.81■□□□□ 0.76
HOXD13P35453 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.81■□□□□ 0.76
HOXD13P35453 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD13P35453 AL136038.3-201ENST00000561909 1096 ntBASIC19.81■□□□□ 0.76
HOXD13P35453 LINC01238-205ENST00000567549 1107 ntBASIC19.81■□□□□ 0.76
HOXD13P35453 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXD13P35453 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD13P35453 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD13P35453 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 AL353692.3-201ENST00000407031 1396 ntBASIC19.81■□□□□ 0.76
HOXD13P35453 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD13P35453 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD13P35453 Z83836.1-201ENST00000624605 1642 ntBASIC19.8■□□□□ 0.76
HOXD13P35453 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXD13P35453 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD13P35453 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXD13P35453 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 AC006116.8-202ENST00000587620 1550 ntBASIC19.8■□□□□ 0.76
HOXD13P35453 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD13P35453 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXD13P35453 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD13P35453 GPR32P1-201ENST00000601788 811 ntBASIC19.8■□□□□ 0.76
HOXD13P35453 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD13P35453 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXD13P35453 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXD13P35453 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXD13P35453 AC012317.2-201ENST00000623305 2251 ntBASIC19.79■□□□□ 0.76
HOXD13P35453 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD13P35453 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD13P35453 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD13P35453 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXD13P35453 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD13P35453 AL645929.1-201ENST00000420084 975 ntBASIC19.79■□□□□ 0.76
HOXD13P35453 KRT18P65-201ENST00000439811 1286 ntBASIC19.79■□□□□ 0.76
HOXD13P35453 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXD13P35453 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.79■□□□□ 0.76
HOXD13P35453 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXD13P35453 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HOXD13P35453 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD13P35453 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD13P35453 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD13P35453 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXD13P35453 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms