Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXA11P31270 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HOXA11P31270 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HOXA11P31270 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA11P31270 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXA11P31270 AC087289.5-201ENST00000586076 3175 ntBASIC19.56■□□□□ 0.72
HOXA11P31270 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HOXA11P31270 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
HOXA11P31270 AC093677.2-201ENST00000600169 1863 ntBASIC19.56■□□□□ 0.72
HOXA11P31270 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
HOXA11P31270 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA11P31270 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXA11P31270 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA11P31270 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXA11P31270 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA11P31270 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA11P31270 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.56■□□□□ 0.72
HOXA11P31270 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA11P31270 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.56■□□□□ 0.72
HOXA11P31270 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXA11P31270 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA11P31270 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.56■□□□□ 0.72
HOXA11P31270 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXA11P31270 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HOXA11P31270 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
HOXA11P31270 AC120498.9-201ENST00000339021 3867 ntBASIC19.56■□□□□ 0.72
HOXA11P31270 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HOXA11P31270 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA11P31270 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA11P31270 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA11P31270 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA11P31270 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXA11P31270 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXA11P31270 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXA11P31270 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HOXA11P31270 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HOXA11P31270 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.55■□□□□ 0.72
HOXA11P31270 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.55■□□□□ 0.72
HOXA11P31270 DUTP2-201ENST00000519164 463 ntBASIC19.55■□□□□ 0.72
HOXA11P31270 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HOXA11P31270 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.55■□□□□ 0.72
HOXA11P31270 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.55■□□□□ 0.72
HOXA11P31270 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXA11P31270 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXA11P31270 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXA11P31270 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXA11P31270 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXA11P31270 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXA11P31270 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXA11P31270 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXA11P31270 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXA11P31270 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXA11P31270 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA11P31270 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXA11P31270 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HOXA11P31270 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA11P31270 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA11P31270 AC097374.2-201ENST00000618617 1306 ntBASIC19.54■□□□□ 0.72
HOXA11P31270 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA11P31270 AL096828.2-201ENST00000567259 1965 ntBASIC19.54■□□□□ 0.72
HOXA11P31270 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA11P31270 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA11P31270 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA11P31270 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms