Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.85■□□□□ 0.45
VARSP26640 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARSP26640 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VARSP26640 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VARSP26640 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARSP26640 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARSP26640 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.85■□□□□ 0.45
VARSP26640 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARSP26640 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VARSP26640 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VARSP26640 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.85■□□□□ 0.45
VARSP26640 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.85■□□□□ 0.45
VARSP26640 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.85■□□□□ 0.45
VARSP26640 KRT18P23-201ENST00000435622 1283 ntBASIC17.85■□□□□ 0.45
VARSP26640 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.85■□□□□ 0.45
VARSP26640 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.85■□□□□ 0.45
VARSP26640 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.85■□□□□ 0.45
VARSP26640 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.85■□□□□ 0.45
VARSP26640 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VARSP26640 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VARSP26640 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VARSP26640 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.85■□□□□ 0.45
VARSP26640 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
VARSP26640 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VARSP26640 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.84■□□□□ 0.45
VARSP26640 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
VARSP26640 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VARSP26640 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.84■□□□□ 0.45
VARSP26640 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VARSP26640 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VARSP26640 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
VARSP26640 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.84■□□□□ 0.45
VARSP26640 RNF152P1-201ENST00000397754 604 ntBASIC17.84■□□□□ 0.45
VARSP26640 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.84■□□□□ 0.45
VARSP26640 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.84■□□□□ 0.45
VARSP26640 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.84■□□□□ 0.45
VARSP26640 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.84■□□□□ 0.45
VARSP26640 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.84■□□□□ 0.45
VARSP26640 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARSP26640 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VARSP26640 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARSP26640 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VARSP26640 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.83■□□□□ 0.45
VARSP26640 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VARSP26640 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
VARSP26640 AC090340.1-201ENST00000620778 4980 ntBASIC17.83■□□□□ 0.45
VARSP26640 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.83■□□□□ 0.45
VARSP26640 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARSP26640 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARSP26640 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARSP26640 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARSP26640 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 FAM8A6P-201ENST00000407496 1135 ntBASIC17.83■□□□□ 0.44
VARSP26640 AC009947.2-201ENST00000444014 672 ntBASIC17.83■□□□□ 0.44
VARSP26640 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.83■□□□□ 0.44
VARSP26640 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.83■□□□□ 0.44
VARSP26640 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.83■□□□□ 0.44
VARSP26640 AL031432.5-201ENST00000641059 760 ntBASIC17.83■□□□□ 0.44
VARSP26640 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARSP26640 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
VARSP26640 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 AL356309.3-201ENST00000624132 1934 ntBASIC17.82■□□□□ 0.44
VARSP26640 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms