Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO1P25800 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO1P25800 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO1P25800 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO1P25800 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO1P25800 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 AC020763.4-201ENST00000623414 4170 ntBASIC15.25■□□□□ 0.03
LMO1P25800 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO1P25800 PVRIG2P-201ENST00000435460 978 ntBASIC15.25■□□□□ 0.03
LMO1P25800 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO1P25800 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.25■□□□□ 0.03
LMO1P25800 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO1P25800 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
LMO1P25800 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO1P25800 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
LMO1P25800 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.25■□□□□ 0.03
LMO1P25800 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LMO1P25800 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO1P25800 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
LMO1P25800 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO1P25800 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO1P25800 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO1P25800 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LMO1P25800 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.24■□□□□ 0.03
LMO1P25800 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LMO1P25800 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO1P25800 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
LMO1P25800 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO1P25800 SLC25A3P1-201ENST00000443844 931 ntBASIC15.24■□□□□ 0.03
LMO1P25800 FAM210CP-201ENST00000445714 574 ntBASIC15.24■□□□□ 0.03
LMO1P25800 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.24■□□□□ 0.03
LMO1P25800 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.24■□□□□ 0.03
LMO1P25800 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO1P25800 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
LMO1P25800 AC012306.2-201ENST00000609350 630 ntBASIC15.24■□□□□ 0.03
LMO1P25800 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 AL031432.5-201ENST00000641059 760 ntBASIC15.24■□□□□ 0.03
LMO1P25800 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO1P25800 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO1P25800 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LMO1P25800 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LMO1P25800 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO1P25800 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LMO1P25800 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.23■□□□□ 0.03
LMO1P25800 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO1P25800 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms