Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC01311-201ENST00000565162 1445 ntBASIC18.13■□□□□ 0.49
XRCC1P18887 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
XRCC1P18887 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
XRCC1P18887 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
XRCC1P18887 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
XRCC1P18887 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.12■□□□□ 0.49
XRCC1P18887 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
XRCC1P18887 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
XRCC1P18887 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.12■□□□□ 0.49
XRCC1P18887 ZNF444P1-201ENST00000559497 298 ntBASIC18.12■□□□□ 0.49
XRCC1P18887 AL136038.3-201ENST00000561909 1096 ntBASIC18.12■□□□□ 0.49
XRCC1P18887 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.12■□□□□ 0.49
XRCC1P18887 MIR3917-201ENST00000580971 93 ntBASIC18.12■□□□□ 0.49
XRCC1P18887 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.12■□□□□ 0.49
XRCC1P18887 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
XRCC1P18887 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
XRCC1P18887 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.12■□□□□ 0.49
XRCC1P18887 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC1P18887 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.11■□□□□ 0.49
XRCC1P18887 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 ESPNP-201ENST00000270691 2015 ntBASIC18.11■□□□□ 0.49
XRCC1P18887 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
XRCC1P18887 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 PCED1CP-201ENST00000419887 785 ntBASIC18.11■□□□□ 0.49
XRCC1P18887 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.11■□□□□ 0.49
XRCC1P18887 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.11■□□□□ 0.49
XRCC1P18887 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.11■□□□□ 0.49
XRCC1P18887 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.11■□□□□ 0.49
XRCC1P18887 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
XRCC1P18887 AC083849.1-201ENST00000615227 514 ntBASIC18.11■□□□□ 0.49
XRCC1P18887 AP000550.4-202ENST00000639755 178 ntBASIC18.11■□□□□ 0.49
XRCC1P18887 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC1P18887 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
XRCC1P18887 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC1P18887 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
XRCC1P18887 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
XRCC1P18887 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
XRCC1P18887 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
XRCC1P18887 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.1■□□□□ 0.49
XRCC1P18887 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 HBZP1-201ENST00000354915 429 ntBASIC18.1■□□□□ 0.49
XRCC1P18887 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.1■□□□□ 0.49
XRCC1P18887 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.1■□□□□ 0.49
XRCC1P18887 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.1■□□□□ 0.49
XRCC1P18887 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
XRCC1P18887 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.1■□□□□ 0.49
XRCC1P18887 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.1■□□□□ 0.49
XRCC1P18887 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
XRCC1P18887 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC1P18887 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms