Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DEFA4P12838 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
DEFA4P12838 AC135776.1-201ENST00000319817 2481 ntBASIC14.8□□□□□ -0.04
DEFA4P12838 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.8□□□□□ -0.04
DEFA4P12838 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DEFA4P12838 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.79□□□□□ -0.04
DEFA4P12838 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.79□□□□□ -0.04
DEFA4P12838 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.79□□□□□ -0.04
DEFA4P12838 AC012618.2-201ENST00000428058 849 ntBASIC14.79□□□□□ -0.04
DEFA4P12838 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.79□□□□□ -0.04
DEFA4P12838 NUDT16P1-203ENST00000513809 620 ntBASIC14.79□□□□□ -0.04
DEFA4P12838 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
DEFA4P12838 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.79□□□□□ -0.04
DEFA4P12838 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 AC009053.2-201ENST00000563701 2365 ntBASIC14.79□□□□□ -0.04
DEFA4P12838 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.79□□□□□ -0.04
DEFA4P12838 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.79□□□□□ -0.04
DEFA4P12838 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.79□□□□□ -0.04
DEFA4P12838 AP000692.2-201ENST00000608391 879 ntBASIC14.79□□□□□ -0.04
DEFA4P12838 PCDHA12-202ENST00000613593 2588 ntBASIC14.79□□□□□ -0.04
DEFA4P12838 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.79□□□□□ -0.04
DEFA4P12838 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.79□□□□□ -0.04
DEFA4P12838 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
DEFA4P12838 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
DEFA4P12838 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.78□□□□□ -0.04
DEFA4P12838 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.78□□□□□ -0.04
DEFA4P12838 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
DEFA4P12838 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
DEFA4P12838 KRT8P32-201ENST00000512863 1461 ntBASIC14.78□□□□□ -0.04
DEFA4P12838 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.78□□□□□ -0.04
DEFA4P12838 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.78□□□□□ -0.04
DEFA4P12838 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.78□□□□□ -0.04
DEFA4P12838 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
DEFA4P12838 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 ABHD17AP1-201ENST00000358206 933 ntBASIC14.78□□□□□ -0.04
DEFA4P12838 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 MIR718-201ENST00000390190 70 ntBASIC14.78□□□□□ -0.04
DEFA4P12838 AC008040.2-201ENST00000461049 708 ntBASIC14.78□□□□□ -0.04
DEFA4P12838 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 DGCR10-201ENST00000609839 495 ntBASIC14.78□□□□□ -0.04
DEFA4P12838 AL049637.2-201ENST00000641778 930 ntBASIC14.78□□□□□ -0.04
DEFA4P12838 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
DEFA4P12838 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.78□□□□□ -0.04
DEFA4P12838 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
DEFA4P12838 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.78□□□□□ -0.04
DEFA4P12838 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
DEFA4P12838 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
DEFA4P12838 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
DEFA4P12838 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
DEFA4P12838 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
DEFA4P12838 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
DEFA4P12838 RCC2P3-201ENST00000418112 1537 ntBASIC14.77□□□□□ -0.04
DEFA4P12838 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms