Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.69■□□□□ 0.26
COX6A1P12074 SLC25A6P4-201ENST00000586535 553 ntBASIC16.69■□□□□ 0.26
COX6A1P12074 AC011467.2-201ENST00000598425 242 ntBASIC16.69■□□□□ 0.26
COX6A1P12074 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.69■□□□□ 0.26
COX6A1P12074 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.69■□□□□ 0.26
COX6A1P12074 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COX6A1P12074 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COX6A1P12074 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
COX6A1P12074 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.68■□□□□ 0.26
COX6A1P12074 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COX6A1P12074 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.68■□□□□ 0.26
COX6A1P12074 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.68■□□□□ 0.26
COX6A1P12074 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 TP73-AS1-207ENST00000624167 988 ntBASIC16.68■□□□□ 0.26
COX6A1P12074 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.68■□□□□ 0.26
COX6A1P12074 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.68■□□□□ 0.26
COX6A1P12074 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
COX6A1P12074 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COX6A1P12074 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.67■□□□□ 0.26
COX6A1P12074 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.67■□□□□ 0.26
COX6A1P12074 AC093503.3-201ENST00000624917 2352 ntBASIC16.67■□□□□ 0.26
COX6A1P12074 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.67■□□□□ 0.26
COX6A1P12074 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COX6A1P12074 TNXA-203ENST00000507684 2038 ntBASIC16.67■□□□□ 0.26
COX6A1P12074 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COX6A1P12074 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COX6A1P12074 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COX6A1P12074 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
COX6A1P12074 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.67■□□□□ 0.26
COX6A1P12074 MRPL3P1-201ENST00000400109 1033 ntBASIC16.67■□□□□ 0.26
COX6A1P12074 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
COX6A1P12074 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.67■□□□□ 0.26
COX6A1P12074 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.67■□□□□ 0.26
COX6A1P12074 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.67■□□□□ 0.26
COX6A1P12074 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.67■□□□□ 0.26
COX6A1P12074 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.67■□□□□ 0.26
COX6A1P12074 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.67■□□□□ 0.26
COX6A1P12074 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.67■□□□□ 0.26
COX6A1P12074 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COX6A1P12074 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.67■□□□□ 0.26
COX6A1P12074 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COX6A1P12074 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.67■□□□□ 0.26
COX6A1P12074 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COX6A1P12074 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COX6A1P12074 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COX6A1P12074 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COX6A1P12074 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COX6A1P12074 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
COX6A1P12074 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COX6A1P12074 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.66■□□□□ 0.26
COX6A1P12074 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms